BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D06SP1|AL425685
(706 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig933 945 0.0
>3x_Contig933
Length = 3686
Score = 945 bits (475), Expect = 0.0
Identities = 514/525 (97%), Gaps = 4/525 (0%)
Strand = Plus / Minus
Query: 1 aacgttaagacgaatttggtcaaatttcagtctaagaraccaatagaccctgaggatttc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 536 aacgttaagacgaatttggtcaaatttcagtctaagaaaccaatagaccctgaggatttc 477
Query: 61 catttacccatcagattacatcgtaaggrtactagaaacttgcaattccagttgaccaga 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 476 catttacccatcagattacatcgtaaggatactagaaacttgcaattccagttgaccaga 417
Query: 121 gcggaaattgtgcaaagacagaaggraattgcggaattcaagcagagacaactcgaagaa 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 416 gcggaaattgtgcaaagacagaaggaaattgcggaattcaagcagagacaactcgaagaa 357
Query: 181 gcaggaggtgcaggaccgggtactggcggtagcaactcaacgccgacagcatctaaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcaggaggtgcaggaccgggtactggcggtagcaactcaacgccgacagcatctaaaggt 297
Query: 241 aacagtactggtggaagtttctctcaatctaacgggaaaccatataatagcaaacaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aacagtactggtggaagtttctctcaatctaacgggaaaccatataatagcaaacaagga 237
Query: 301 acgccagtt-caggtacgttg-aatggtccaaaagtgggagtnactaattatnataatac 358
||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||
Sbjct: 236 acgccagttccaggtacgttgaaatggtccaaaagtgggagtaactaattataataatac 177
Query: 359 agatggtcctaacgtgaatrataacggttcatcaagttcagagctgaaaactggcacaga 418
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 agatggtcctaacgtgaataataacggttcatcaagttcagagctgaaaactggcacaga 117
Query: 419 ttccggctctcctccaaatgggaaagaaggaactcccagcaataccgtcactatccttga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ttccggctctcctccaaatgggaaagaaggaactcccagcaataccgtcactatccttga 57
Query: 479 agaggc-tggagtggcagaagacccaact-aaggtcggtatggtt 521
|||||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 56 agaggcttggtgtggcagaagacccaactaaaggtcggtatggtt 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4128
Number of Sequences: 1807
Number of extensions: 4128
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 706
length of database: 10,358,551
effective HSP length: 16
effective length of query: 690
effective length of database: 10,329,639
effective search space: 7127450910
effective search space used: 7127450910
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)